CommonCoordinateSpaceVersions: AMB-CCF library

Related schema specification: CommonCoordinateSpaceVersion

AMB-CCF_v1

metadata sheet

@id:: https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v1
@type:: https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion
abbreviation:: AMB CCF
fullName:: Allen Mouse Brain Common Coordinate Framework
homepage:: https://portal.brain-map.org/
howToCite:: Lein E, Hawrylycz M, Ao N, et al.; ‘Genome-wide atlas of gene expression in the adult mouse brain.’; Nature; Jan 2007; 445(7124):168–176. [doi: 10.1038/nature05453](https://doi.org/10.1038/nature05453)
shortName:: Allen Mouse Brain CCF
versionIdentifier:: v1
versionInnovation:: The first version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv1) is a 3D reconstruction of one brain hemisphere at 200µm resolution.

metadata sheet

@id:: https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v2
@type:: https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion
abbreviation:: AMB CCF
fullName:: Allen Mouse Brain Common Coordinate Framework
homepage:: https://portal.brain-map.org/
howToCite:: Oh S, Harris J, Ng L, et al.; ‘A mesoscale connectome of the mouse brain.’; Nature; Apr 2014; 508(7495):207–214. [doi: 10.1038/nature13186](https://doi.org/10.1038/nature13186)
shortName:: Allen Mouse Brain CCF
versionIdentifier:: v2
versionInnovation:: The second version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv2) is a 3D reconstruction of a whole brain at 100µm resolution.

metadata sheet

@id:: https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v3-RAS
@type:: https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion
abbreviation:: AMB CCF
fullName:: Allen Mouse Brain Common Coordinate Framework
homepage:: https://portal.brain-map.org/
howToCite:: Wang Q, Ding S-L, Li Y, et al.; ‘The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.’; Cell; May 2020; 181(4):936-953.e20. [doi: 10.1016/j.cell.2020.04.007](https://doi.org/10.1016/j.cell.2020.04.007)
releaseDate:: 2015-05-01
shortName:: Allen Mouse Brain CCF
versionIdentifier:: v3-RAS
versionInnovation:: The third version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv3-RAS) is a 3D reconstruction of a whole brain at 10µm resolution. This alternative CCFv3 version was transformed to RAS axes orientation.

metadata sheet

@id:: https://openminds.ebrains.eu/instances/commonCoordinateSpaceVersion/AMB-CCF_v3
@type:: https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion
abbreviation:: AMB CCF
fullName:: Allen Mouse Brain Common Coordinate Framework
homepage:: https://portal.brain-map.org/
howToCite:: Wang Q, Ding S-L, Li Y, et al.; ‘The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.’; Cell; May 2020; 181(4):936-953.e20. [doi: 10.1016/j.cell.2020.04.007](https://doi.org/10.1016/j.cell.2020.04.007)
releaseDate:: 2015-05-01
shortName:: Allen Mouse Brain CCF
versionIdentifier:: v3
versionInnovation:: The third version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv3) is a 3D reconstruction of a whole brain at 10µm resolution.