CommonCoordinateSpaceVersions: AMB-CCF library
Related schema specification: CommonCoordinateSpaceVersion
AMB-CCF_v1
metadata sheet
- @id:
https://openminds.om-i.org/instances/commonCoordinateSpaceVersion/AMB-CCF_v1
- @type:
https://openminds.om-i.org/types/CommonCoordinateSpaceVersion
- abbreviation:
AMB CCF
- fullName:
Allen Mouse Brain Common Coordinate Framework
- homepage:
- howToCite:
Lein E, Hawrylycz M, Ao N, et al.; ‘Genome-wide atlas of gene expression in the adult mouse brain.’; Nature; Jan 2007; 445(7124):168–176. [doi: 10.1038/nature05453](https://doi.org/10.1038/nature05453)
- shortName:
Allen Mouse Brain CCF
- versionIdentifier:
v1
- versionInnovation:
The first version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv1) is a 3D reconstruction of one brain hemisphere at 200µm resolution.
AMB-CCF_v2
metadata sheet
- @id:
https://openminds.om-i.org/instances/commonCoordinateSpaceVersion/AMB-CCF_v2
- @type:
https://openminds.om-i.org/types/CommonCoordinateSpaceVersion
- abbreviation:
AMB CCF
- fullName:
Allen Mouse Brain Common Coordinate Framework
- homepage:
- howToCite:
Oh S, Harris J, Ng L, et al.; ‘A mesoscale connectome of the mouse brain.’; Nature; Apr 2014; 508(7495):207–214. [doi: 10.1038/nature13186](https://doi.org/10.1038/nature13186)
- shortName:
Allen Mouse Brain CCF
- versionIdentifier:
v2
- versionInnovation:
The second version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv2) is a 3D reconstruction of a whole brain at 100µm resolution.
AMB-CCF_v3-RAS
metadata sheet
- @id:
https://openminds.om-i.org/instances/commonCoordinateSpaceVersion/AMB-CCF_v3-RAS
- @type:
https://openminds.om-i.org/types/CommonCoordinateSpaceVersion
- abbreviation:
AMB CCF
- fullName:
Allen Mouse Brain Common Coordinate Framework
- homepage:
- howToCite:
Wang Q, Ding S-L, Li Y, et al.; ‘The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.’; Cell; May 2020; 181(4):936-953.e20. [doi: 10.1016/j.cell.2020.04.007](https://doi.org/10.1016/j.cell.2020.04.007)
- releaseDate:
2015-05-01
- shortName:
Allen Mouse Brain CCF
- versionIdentifier:
v3-RAS
- versionInnovation:
The third version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv3-RAS) is a 3D reconstruction of a whole brain at 10µm resolution. This alternative CCFv3 version was transformed to RAS axes orientation.
AMB-CCF_v3
metadata sheet
- @id:
https://openminds.om-i.org/instances/commonCoordinateSpaceVersion/AMB-CCF_v3
- @type:
https://openminds.om-i.org/types/CommonCoordinateSpaceVersion
- abbreviation:
AMB CCF
- fullName:
Allen Mouse Brain Common Coordinate Framework
- homepage:
- howToCite:
Wang Q, Ding S-L, Li Y, et al.; ‘The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.’; Cell; May 2020; 181(4):936-953.e20. [doi: 10.1016/j.cell.2020.04.007](https://doi.org/10.1016/j.cell.2020.04.007)
- releaseDate:
2015-05-01
- shortName:
Allen Mouse Brain CCF
- versionIdentifier:
v3
- versionInnovation:
The third version of the ‘Allen Mouse Brain Common Coordinate Framework’ (CCFv3) is a 3D reconstruction of a whole brain at 10µm resolution.