ProtocolExecution

Semantic name:

https://openminds.ebrains.eu/core/ProtocolExecution

Display as:

Protocol execution

Structured information on a protocol execution.



Properties

Required:

input, output, protocol

Optional:

description, lookupLabel, parameterSet, preparationType, semanticallyAnchoredTo, studyTarget


description

Longer statement or account giving the characteristics of someone or something.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/description

value type:
string
formatting: text/markdown; multiline
instructions:

Enter a description of this protocol execution.

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input

Something or someone that is put into or participates in a process or machine.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/input

value type:
instructions:

Add all inputs (subject state, tissue sample state, file instance or file bundle) used by this protocol execution.

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lookupLabel

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/lookupLabel

value type:
string
formatting: text/plain; singleline
instructions:

Enter a lookup label for this protocol execution that may help you to more easily find it again.

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output

Something or someone that comes out of, is delivered or produced by a process or machine.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/output

value type:
instructions:

Add all outputs (subject state, tissue sample state, file instance or file bundle) generated by this protocol execution.

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parameterSet

Manner, position, or direction in which digital or physical properties are set to determine a particular function, characteristics or behavior of something.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/parameterSet

value type:
embedded object array (1-N) of type
instructions:

Add all important parameters grouped in context-specific sets that were used in this protocol execution.

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preparationType

Distinct class of actions or processes that make something ready for use or service.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/preparationType

value type:
linked object of type
instructions:

Add the initial preparation type for this protocol execution.

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protocol

Plan that describes the process of a scientific or medical experiment, treatment, or procedure.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/protocol

value type:
linked object of type
instructions:

Add the protocol of this protocol execution.

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semanticallyAnchoredTo

Reference to a related anatomical structure without providing a quantitative proof of the claimed relation.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/semanticallyAnchoredTo

value type:
linked object array (1-N) of type
AnatomicalEntity [TYPE_ERROR]
instructions:

Add all anatomical entities to which the outputs of this protocol execution can be semantically anchored to.

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studyTarget

Structure or function that was targeted within a study.

schema_specifications

semantic name:

https://openminds.ebrains.eu/vocab/studyTarget

value type:
instructions:

Add all study targets of this model version.

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