ParcellationEntityVersions: WHSSDatlas_v2 library

Related schema specification: ParcellationEntityVersion

WHSSDatlas_v2_alveusOfTheHippocampus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_alveusOfTheHippocampus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: alv
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_hippocampalWhiteMatter
lookupLabel:: WHSSDatlas_v2_alveusOfTheHippocampus
name:: alveus of the hippocampus
versionIdentifier:: v2

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WHSSDatlas_v2_anteriorCommissure

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_anteriorCommissure
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: .label file name “anterior commissure” has been corrected to .mbat file name “anterior commissure, intrabulbar part”; for details, see atlas documentation
alternateName:: aci
correctedName:: anterior commissure, intrabulbar part
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_anteriorCommissure
lookupLabel:: WHSSDatlas_v2_anteriorCommissure
name:: anterior commissure
versionIdentifier:: v2

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WHSSDatlas_v2_anteriorCommissureAnteriorPart

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_anteriorCommissureAnteriorPart
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: aca, anterior commissure, anterior limb
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_anteriorCommissure
lookupLabel:: WHSSDatlas_v2_anteriorCommissureAnteriorPart
name:: anterior commissure, anterior part
versionIdentifier:: v2

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WHSSDatlas_v2_anteriorCommissurePosteriorPart

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_anteriorCommissurePosteriorPart
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: acp, anterior commissure, posterior limb
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_anteriorCommissure
lookupLabel:: WHSSDatlas_v2_anteriorCommissurePosteriorPart
name:: anterior commissure, posterior part
versionIdentifier:: v2

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WHSSDatlas_v2_ascendingFibersOfTheFacialNerve

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_ascendingFibersOfTheFacialNerve
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: asc7
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_facialNerve
lookupLabel:: WHSSDatlas_v2_ascendingFibersOfTheFacialNerve
name:: ascending fibers of the facial nerve
versionIdentifier:: v2

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WHSSDatlas_v2_basalForebrainRegion

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_basalForebrainRegion
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “basal forebrain region”, which is an error; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: BFR-u
correctedName:: basal forebrain region, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_basalForebrainRegion
name:: basal forebrain region
versionIdentifier:: v2

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WHSSDatlas_v2_bedNucleusOfTheStriaTerminalis

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_bedNucleusOfTheStriaTerminalis
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: BNST
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_bedNucleusOfTheStriaTerminalis
name:: bed nucleus of the stria terminalis
versionIdentifier:: v2

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WHSSDatlas_v2_brachiumOfTheSuperiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_brachiumOfTheSuperiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: bsc
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatterOfTheTectum
lookupLabel:: WHSSDatlas_v2_brachiumOfTheSuperiorColliculus
name:: brachium of the superior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_brainstem

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_brainstem
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: .label file name “brainstem” does not match the name in the .mbat file (“brain stem”) - same meaning but different spelling; name was also changed to reflect the possibility for subdivision; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: BS-u, brain stem, unspecified
correctedName:: brainstem, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_brainstem
name:: brainstem
versionIdentifier:: v2

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WHSSDatlas_v2_centralCanal

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_centralCanal
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: “central canal” and “spinal cord” (annotated) had “spinal cord” (hierarchical term) as parent; this was changed in v3 and later versions (“central canal” has parent “ventricular system” and “spinal cord” has no parent structure; no hierarchical term has been added to this parcellation entity version
alternateName:: CC
hasAnnotation:: COMING SOON
lookupLabel:: WHSSDatlas_v2_centralCanal
name:: central canal
versionIdentifier:: v2

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WHSSDatlas_v2_cingulateCortexArea2

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_cingulateCortexArea2
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Cg2, cingulate area 2
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_cingulateCortexArea2
name:: cingulate cortex, area 2
versionIdentifier:: v2

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WHSSDatlas_v2_commissuralStriaTerminalis

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_commissuralStriaTerminalis
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: cst
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_commissuralStriaTerminalis
name:: commissural stria terminalis
versionIdentifier:: v2

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WHSSDatlas_v2_commissureOfTheInferiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_commissureOfTheInferiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: cic, inferior colliculus, commissure
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatterOfTheTectum
lookupLabel:: WHSSDatlas_v2_commissureOfTheInferiorColliculus
name:: commissure of the inferior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_commissureOfTheSuperiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_commissureOfTheSuperiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: csc
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatterOfTheTectum
lookupLabel:: WHSSDatlas_v2_commissureOfTheSuperiorColliculus
name:: commissure of the superior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_cornuAmmonis1

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_cornuAmmonis1
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: CA1
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_cornuAmmonis1
name:: cornu ammonis 1
versionIdentifier:: v2

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WHSSDatlas_v2_cornuAmmonis2

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_cornuAmmonis2
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: CA2
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_cornuAmmonis2
name:: cornu ammonis 2
versionIdentifier:: v2

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WHSSDatlas_v2_cornuAmmonis3

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_cornuAmmonis3
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: CA3
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_cornuAmmonis3
name:: cornu ammonis 3
versionIdentifier:: v2

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WHSSDatlas_v2_corpusCallosumAndAssociatedSubcorticalWhiteMatter

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_corpusCallosumAndAssociatedSubcorticalWhiteMatter
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: cc-ec-cing-dwm
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatter
lookupLabel:: WHSSDatlas_v2_corpusCallosumAndAssociatedSubcorticalWhiteMatter
name:: corpus callosum and associated subcortical white matter
versionIdentifier:: v2

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WHSSDatlas_v2_deeperLayersOfTheSuperiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_deeperLayersOfTheSuperiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: SuD
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_tectum
lookupLabel:: WHSSDatlas_v2_deeperLayersOfTheSuperiorColliculus
name:: deeper layers of the superior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_dentateGyrus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_dentateGyrus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: DG
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_dentateGyrus
name:: dentate gyrus
versionIdentifier:: v2

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WHSSDatlas_v2_descendingCorticofugalPathways

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_descendingCorticofugalPathways
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: .label file name “descending corticofugal pathways” does not match the name in the .mbat file (“corticofugal pathways”), which is an error; .label file name is correct; for details, see atlas documentation
alternateName:: corticofugal tract and corona radiata, ic-cp-lfp-py
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_corticofugalPathways
lookupLabel:: WHSSDatlas_v2_descendingCorticofugalPathways
name:: descending corticofugal pathways
versionIdentifier:: v2

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WHSSDatlas_v2_entopeduncularNucleus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_entopeduncularNucleus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: EP
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_entopeduncularNucleus
name:: entopeduncular nucleus
versionIdentifier:: v2

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WHSSDatlas_v2_entorhinalCortex

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_entorhinalCortex
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “entorhinal cortex”, which is an error; for details, see atlas documentation
alternateName:: MEC
correctedName:: medial entorhinal cortex
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_entorhinalCortex
name:: entorhinal cortex
versionIdentifier:: v2

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WHSSDatlas_v2_facialNerve

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_facialNerve
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “facial nerve”, which is an error; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: 7n-u
correctedName:: facial nerve, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_facialNerve
lookupLabel:: WHSSDatlas_v2_facialNerve
name:: facial nerve
versionIdentifier:: v2

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WHSSDatlas_v2_fasciculusRetroflexus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_fasciculusRetroflexus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: fr
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_fasciculusRetroflexus
name:: fasciculus retroflexus
versionIdentifier:: v2

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WHSSDatlas_v2_fasciolaCinereum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_fasciolaCinereum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: FC
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_fasciolaCinereum
name:: fasciola cinereum
versionIdentifier:: v2

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WHSSDatlas_v2_fimbriaOfTheHippocampus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_fimbriaOfTheHippocampus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: fi
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_hippocampalWhiteMatter
lookupLabel:: WHSSDatlas_v2_fimbriaOfTheHippocampus
name:: fimbria of the hippocampus
versionIdentifier:: v2

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WHSSDatlas_v2_fornix

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_fornix
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: f
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_hippocampalWhiteMatter
lookupLabel:: WHSSDatlas_v2_fornix
name:: fornix
versionIdentifier:: v2

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WHSSDatlas_v2_frontalAssociationCortex

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_frontalAssociationCortex
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: FrA
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_frontalAssociationCortex
name:: frontal association cortex
versionIdentifier:: v2

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WHSSDatlas_v2_genuOfTheFacialNerve

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_genuOfTheFacialNerve
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: g7
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_facialNerve
lookupLabel:: WHSSDatlas_v2_genuOfTheFacialNerve
name:: genu of the facial nerve
versionIdentifier:: v2

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WHSSDatlas_v2_globusPallidus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_globusPallidus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: GP, Gpe, globus pallidus external
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_globusPallidus
name:: globus pallidus
versionIdentifier:: v2

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WHSSDatlas_v2_glomerularLayerOfTheAccessoryOlfactoryBulb

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_glomerularLayerOfTheAccessoryOlfactoryBulb
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: GlA
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_olfactoryBulb
lookupLabel:: WHSSDatlas_v2_glomerularLayerOfTheAccessoryOlfactoryBulb
name:: glomerular layer of the accessory olfactory bulb
versionIdentifier:: v2

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WHSSDatlas_v2_glomerularLayerOfTheOlfactoryBulb

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_glomerularLayerOfTheOlfactoryBulb
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Gl
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_olfactoryBulb
lookupLabel:: WHSSDatlas_v2_glomerularLayerOfTheOlfactoryBulb
name:: glomerular layer of the olfactory bulb
versionIdentifier:: v2

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WHSSDatlas_v2_granuleCellLevelOfTheCerebellum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_granuleCellLevelOfTheCerebellum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: .label file name “granule cell level of the cerebellum” does not match the name in the .mbat file (“deeper cerebellum”); name was changed to reflect the possibility for subdivision; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: Cb-u, deeper cerebellum
correctedName:: cerebellum, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebellum
lookupLabel:: WHSSDatlas_v2_granuleCellLevelOfTheCerebellum
name:: granule cell level of the cerebellum
versionIdentifier:: v2

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WHSSDatlas_v2_habenularCommissure

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_habenularCommissure
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: hbc
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_habenularCommissure
name:: habenular commissure
versionIdentifier:: v2

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WHSSDatlas_v2_hypothalamicRegion

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_hypothalamicRegion
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “hypothalamic region”, but name was changed to reflect the possibility for subdivision; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: HTh-u
correctedName:: hypothalamic region, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_hypothalamicRegion
name:: hypothalamic region
versionIdentifier:: v2

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WHSSDatlas_v2_inferiorCerebellarPeduncle

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_inferiorCerebellarPeduncle
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: icp
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebellarAndPrecerebellarWhiteMatter
lookupLabel:: WHSSDatlas_v2_inferiorCerebellarPeduncle
name:: inferior cerebellar peduncle
versionIdentifier:: v2

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WHSSDatlas_v2_inferiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_inferiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: IC
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_tectum
lookupLabel:: WHSSDatlas_v2_inferiorColliculus
name:: inferior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_inferiorOlive

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_inferiorOlive
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: IO
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_inferiorOlive
name:: inferior olive
versionIdentifier:: v2

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WHSSDatlas_v2_innerEar

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_innerEar
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: IE
hasAnnotation:: COMING SOON
lookupLabel:: WHSSDatlas_v2_innerEar
name:: inner ear
versionIdentifier:: v2

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WHSSDatlas_v2_interpeduncularNucleus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_interpeduncularNucleus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: IP
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_interpeduncularNucleus
name:: interpeduncular nucleus
versionIdentifier:: v2

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WHSSDatlas_v2_lateralEntorhinalCortex

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_lateralEntorhinalCortex
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: LEC
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_lateralEntorhinalCortex
name:: lateral entorhinal cortex
versionIdentifier:: v2

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WHSSDatlas_v2_mammillothalamicTract

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_mammillothalamicTract
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “mammillothalamic tract”, which is an error; for details, see atlas documentation
alternateName:: mtg
correctedName:: mammillotegmental tract
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_mammillothalamicTract
name:: mammillothalamic tract
versionIdentifier:: v2

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WHSSDatlas_v2_medialLemniscus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_medialLemniscus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “medial lemniscus”, but name was changed to reflect the possibility for subdivision; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: ml-u
correctedName:: medial lemniscus, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_medialLemniscus
lookupLabel:: WHSSDatlas_v2_medialLemniscus
name:: medial lemniscus
versionIdentifier:: v2

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WHSSDatlas_v2_medialLemniscusDecussation

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_medialLemniscusDecussation
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: mlx
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_medialLemniscus
lookupLabel:: WHSSDatlas_v2_medialLemniscusDecussation
name:: medial lemniscus decussation
versionIdentifier:: v2

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WHSSDatlas_v2_middleCerebellarPeduncle

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_middleCerebellarPeduncle
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: mcp
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebellarAndPrecerebellarWhiteMatter
lookupLabel:: WHSSDatlas_v2_middleCerebellarPeduncle
name:: middle cerebellar peduncle
versionIdentifier:: v2

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WHSSDatlas_v2_molecularLayerOfTheCerebellum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_molecularLayerOfTheCerebellum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Cb-m
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebellum
lookupLabel:: WHSSDatlas_v2_molecularLayerOfTheCerebellum
name:: molecular layer of the cerebellum
versionIdentifier:: v2

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WHSSDatlas_v2_neocortex

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_neocortex
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “neocortex”, which is an error; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: Ncx-u
correctedName:: neocortex, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_neocortex
name:: neocortex
versionIdentifier:: v2

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WHSSDatlas_v2_nucleusOfTheStriaMedullaris

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_nucleusOfTheStriaMedullaris
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: SMn
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_nucleusOfTheStriaMedullaris
name:: nucleus of the stria medullaris
versionIdentifier:: v2

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WHSSDatlas_v2_olfactoryBulb

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_olfactoryBulb
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “olfactory bulb”, which is an error; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: OB-u
correctedName:: olfactory bulb, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_olfactoryBulb
lookupLabel:: WHSSDatlas_v2_olfactoryBulb
name:: olfactory bulb
versionIdentifier:: v2

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WHSSDatlas_v2_opticNerve

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_opticNerve
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: 2n
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_opticFiberSystemAndSupraopticDecussation
lookupLabel:: WHSSDatlas_v2_opticNerve
name:: optic nerve
versionIdentifier:: v2

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WHSSDatlas_v2_opticTractAndOpticChiasm

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_opticTractAndOpticChiasm
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: opt-och
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_opticFiberSystemAndSupraopticDecussation
lookupLabel:: WHSSDatlas_v2_opticTractAndOpticChiasm
name:: optic tract and optic chiasm
versionIdentifier:: v2

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WHSSDatlas_v2_parasubiculum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_parasubiculum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PaS
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_parasubiculum
name:: parasubiculum
versionIdentifier:: v2

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WHSSDatlas_v2_periaqueductalGray

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_periaqueductalGray
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PAG
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_periaqueductalGray
name:: periaqueductal gray
versionIdentifier:: v2

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WHSSDatlas_v2_perirhinalArea35

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_perirhinalArea35
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PER35
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_perirhinalArea35
name:: perirhinal area 35
versionIdentifier:: v2

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WHSSDatlas_v2_perirhinalArea36

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_perirhinalArea36
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PER36
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_perirhinalArea36
name:: perirhinal area 36
versionIdentifier:: v2

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WHSSDatlas_v2_periventricularGray

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_periventricularGray
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PVG
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_periventricularGray
name:: periventricular gray
versionIdentifier:: v2

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WHSSDatlas_v2_pinealGland

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_pinealGland
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PG
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_pinealGland
name:: pineal gland
versionIdentifier:: v2

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WHSSDatlas_v2_pontineNuclei

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_pontineNuclei
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Pn
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_pontineNuclei
name:: pontine nuclei
versionIdentifier:: v2

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WHSSDatlas_v2_posteriorCommissure

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_posteriorCommissure
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: pc
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatter
lookupLabel:: WHSSDatlas_v2_posteriorCommissure
name:: posterior commissure
versionIdentifier:: v2

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WHSSDatlas_v2_postrhinalCortex

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_postrhinalCortex
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: POR
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_postrhinalCortex
name:: postrhinal cortex
versionIdentifier:: v2

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WHSSDatlas_v2_presubiculum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_presubiculum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PrS
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_presubiculum
name:: presubiculum
versionIdentifier:: v2

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WHSSDatlas_v2_pretectalRegion

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_pretectalRegion
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: PRT, PT
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_tectum
lookupLabel:: WHSSDatlas_v2_pretectalRegion
name:: pretectal region
versionIdentifier:: v2

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WHSSDatlas_v2_pyramidalDecussation

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_pyramidalDecussation
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: pyx
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_corticofugalPathways
lookupLabel:: WHSSDatlas_v2_pyramidalDecussation
name:: pyramidal decussation
versionIdentifier:: v2

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WHSSDatlas_v2_septalRegion

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_septalRegion
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Sep
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_septalRegion
name:: septal region
versionIdentifier:: v2

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WHSSDatlas_v2_spinalCord

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_spinalCord
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: “spinal cord” (annotated) had “spinal cord” (hierarchical term) as parent, which was removed in v3 and later versions; here that hierarchical term has not been added as a parcellation entity
alternateName:: SpC
hasAnnotation:: COMING SOON
lookupLabel:: WHSSDatlas_v2_spinalCord
name:: spinal cord
versionIdentifier:: v2

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WHSSDatlas_v2_spinalTrigeminalNucleus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_spinalTrigeminalNucleus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Sp5n
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_spinalTrigeminalNucleus
name:: spinal trigeminal nucleus
versionIdentifier:: v2

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WHSSDatlas_v2_spinalTrigeminalTract

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_spinalTrigeminalTract
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: sp5t
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_whiteMatter
lookupLabel:: WHSSDatlas_v2_spinalTrigeminalTract
name:: spinal trigeminal tract
versionIdentifier:: v2

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WHSSDatlas_v2_striaMedullarisOfTheThalamus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_striaMedullarisOfTheThalamus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: sm, stria medullaris thalami
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_striaMedullarisOfTheThalamus
name:: stria medullaris of the thalamus
versionIdentifier:: v2

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WHSSDatlas_v2_striaTerminalis

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_striaTerminalis
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: st
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_thalamicTracts
lookupLabel:: WHSSDatlas_v2_striaTerminalis
name:: stria terminalis
versionIdentifier:: v2

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WHSSDatlas_v2_striatum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_striatum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: Str
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_striatum
name:: striatum
versionIdentifier:: v2

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WHSSDatlas_v2_subiculum

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_subiculum
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: SUB
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebralCortexIncludingTheNeocortexAndTheHippocampus
lookupLabel:: WHSSDatlas_v2_subiculum
name:: subiculum
versionIdentifier:: v2

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WHSSDatlas_v2_substantiaNigra

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_substantiaNigra
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: SN
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_substantiaNigra
name:: substantia nigra
versionIdentifier:: v2

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WHSSDatlas_v2_subthalamicNucleus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_subthalamicNucleus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: STh
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_subthalamicNucleus
name:: subthalamic nucleus
versionIdentifier:: v2

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WHSSDatlas_v2_superficialGrayLayerOfTheSuperiorColliculus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_superficialGrayLayerOfTheSuperiorColliculus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: SuG
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_tectum
lookupLabel:: WHSSDatlas_v2_superficialGrayLayerOfTheSuperiorColliculus
name:: superficial gray layer of the superior colliculus
versionIdentifier:: v2

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WHSSDatlas_v2_supraopticDecussation

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_supraopticDecussation
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: sox
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_opticFiberSystemAndSupraopticDecussation
lookupLabel:: WHSSDatlas_v2_supraopticDecussation
name:: supraoptic decussation
versionIdentifier:: v2

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WHSSDatlas_v2_thalamus

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_thalamus
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “thalamus”, which is an error; abbreviation for the corrected name has been added under “alternateName”; for details, see atlas documentation
alternateName:: Thal-u
correctedName:: thalamus, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_grayMatter
lookupLabel:: WHSSDatlas_v2_thalamus
name:: thalamus
versionIdentifier:: v2

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WHSSDatlas_v2_transverseFibersOfThePons

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_transverseFibersOfThePons
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: tfp
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_cerebellarAndPrecerebellarWhiteMatter
lookupLabel:: WHSSDatlas_v2_transverseFibersOfThePons
name:: transverse fibers of the pons
versionIdentifier:: v2

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WHSSDatlas_v2_ventralHippocampalCommissure

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_ventralHippocampalCommissure
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
alternateName:: vhc
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_hippocampalWhiteMatter
lookupLabel:: WHSSDatlas_v2_ventralHippocampalCommissure
name:: ventral hippocampal commissure
versionIdentifier:: v2

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WHSSDatlas_v2_ventricularSystem

metadata sheet

@id:: https://openminds.om-i.org/instances/parcellationEntityVersion/WHSSDatlas_v2_ventricularSystem
@type:: https://openminds.om-i.org/types/ParcellationEntityVersion
additionalRemarks:: both .label file name and .mbat file name are “ventricular system”, but name was changed to reflect the possibility for subdivision; for details, see atlas documentation “brain” has been added as parent in accordance with later versions where that hierarchical term exists
alternateName:: V-u
correctedName:: ventricular system, unspecified
hasAnnotation:: COMING SOON
hasParent:: WHSSDatlas_brain
lookupLabel:: WHSSDatlas_v2_ventricularSystem
name:: ventricular system
versionIdentifier:: v2

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